tm.h File Reference

#include "nuri/eigen_config.h"

Include dependency graph for tm.h:

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Classes
class	nuri::TMAlign
	TM-align algorithm. More...
struct	nuri::TMAlignResult
	Result of TM-align algorithm. More...

Namespaces
namespace	nuri

Functions
TMAlignResult	nuri::tm_align (ConstRef< Matrix3Xd > query, ConstRef< Matrix3Xd > templ, TMAlign::InitFlags flags=TMAlign::InitFlags::kDefault, int l_norm=-1, double d0=-1)
	Align two structures using TM-align algorithm.
TMAlignResult	nuri::tm_align (ConstRef< Matrix3Xd > query, ConstRef< Matrix3Xd > templ, ConstRef< ArrayXc > secx, ConstRef< ArrayXc > secy, TMAlign::InitFlags flags=TMAlign::InitFlags::kDefault, int l_norm=-1, double d0=-1)
	Align two structures using TM-align algorithm.
TMAlignResult	nuri::tm_align (ConstRef< Matrix3Xd > query, ConstRef< Matrix3Xd > templ, ConstRef< ArrayXi > y2x, int l_norm=-1, double d0=-1, bool keep_alignment=true)
	Align two structures using TM-align algorithm, with the given alignment. This is also known as the "TM-score" program in the TM-tools suite.